ZooMir::Show

Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.

mir-1959 pre-mir class in Cavia porcellus species.
Index	ID	Species	Mature miRNA (MatMiR)	Match/ MatMiR Length	Chrom	Strand	MatMiR Position	PreMir Position	Confidence	Evo_ Source	Species_ No	Distribution
1	cavPor3-690	Cavia porcellus	mmu-miR-1959	18/20	scaffold_66	-	17-34	4991534-4991604	0.98848	Ortholog	1/10	44/166
2	cavPor3-440	Cavia porcellus	mmu-miR-1959	20/20	scaffold_30	-	13-32	7456961-7457027	0.993887	Ortholog	1/10	44/166
3	cavPor3-439	Cavia porcellus	mmu-miR-1959	18/20	scaffold_30	-	14-31	2154429-2154486	0.86299	Ortholog	1/10	44/166
4	cavPor3-181	Cavia porcellus	mmu-miR-1959	19/20	scaffold_126	+	38-56	339371-339476	0.866644	Ortholog	1/10	44/166
5	cavPor3-765	Cavia porcellus	mmu-miR-1959	18/20	scaffold_89	-	10-27	3194525-3194602	0.978204	Ortholog	1/10	44/166
6	cavPor3-764	Cavia porcellus	mmu-miR-1959	19/20	scaffold_89	+	20-39	6552040-6552115	0.976337	Ortholog	1/10	44/166
7	cavPor3-712	Cavia porcellus	mmu-miR-1959	18/20	scaffold_72	+	11-28	5429759-5429817	0.98826	Ortholog	1/10	44/166
8	cavPor3-542	Cavia porcellus	mmu-miR-1959	19/20	scaffold_42	+	20-39	5109637-5109716	0.950142	Ortholog	1/10	44/166
9	cavPor3-540	Cavia porcellus	mmu-miR-1959	19/20	scaffold_41	-	23-41	15790702-15790786	0.929028	Ortholog	1/10	44/166
10	cavPor3-277	Cavia porcellus	mmu-miR-1959	18/20	scaffold_17	-	30-47	30163461-30163559	0.925533	Ortholog	1/10	44/166
11	cavPor3-243	Cavia porcellus	mmu-miR-1959	18/20	scaffold_15	-	38-55	36971450-36971556	0.827285	Ortholog	1/10	44/166
12	cavPor3-75	Cavia porcellus	mmu-miR-1959	18/20	scaffold_11	-	36-53	50170566-50170670	0.97924	Ortholog	1/10	44/166
13	cavPor3-36	Cavia porcellus	mmu-miR-1959	18/20	scaffold_10	-	12-29	27178726-27178803	0.959573	Ortholog	1/10	44/166
14	cavPor3-728	Cavia porcellus	mmu-miR-1959	19/20	scaffold_8	-	24-42	6972836-6972918	0.966996	Ortholog	1/10	44/166
15	cavPor3-726	Cavia porcellus	mmu-miR-1959	18/20	scaffold_8	+	53-70	56910449-56910527	0.976867	Ortholog	1/10	44/166
16	cavPor3-533	Cavia porcellus	mmu-miR-1959	18/20	scaffold_4	-	12-29	46702981-46703049	0.998914	Ortholog	1/10	44/166
17	cavPor3-314	Cavia porcellus	mmu-miR-1959	18/20	scaffold_2	+	17-34	52080718-52080789	0.976979	Ortholog	1/10	44/166
18	cavPor3-12	Cavia porcellus	mmu-miR-1959	18/20	scaffold_1	+	15-32	7595419-7595500	0.997265	Ortholog	1/10	44/166
19	cavPor3-11	Cavia porcellus	mmu-miR-1959	19/20	scaffold_0	-	31-49	73216244-73216342	0.965441	Ortholog	1/10	44/166
20	cavPor3-609	Cavia porcellus	mmu-miR-1959	19/20	scaffold_499	-	39-58	117639-117747	0.826219	Ortholog	1/10	44/166
21	cavPor3-372	Cavia porcellus	mmu-miR-1959	19/20	scaffold_238	+	51-70	542922-543004	0.982312	Ortholog	1/10	44/166
22	cavPor3-305	Cavia porcellus	mmu-miR-1959	18/20	scaffold_195	+	15-32	505947-506028	0.995558	Ortholog	1/10	44/166
23	cavPor3-254	Cavia porcellus	mmu-miR-1959	19/20	scaffold_160	-	16-35	1932070-1932137	0.995632	Ortholog	1/10	44/166
24	cavPor3-233	Cavia porcellus	mmu-miR-1959	18/20	scaffold_147	-	12-29	737817-737893	0.994282	Ortholog	1/10	44/166
25	cavPor3-61	Cavia porcellus	mmu-miR-1959	19/20	scaffold_109	+	26-45	2334208-2334300	0.895079	Ortholog	1/10	44/166
26	cavPor3-53	Cavia porcellus	mmu-miR-1959	19/20	scaffold_103	+	17-36	1540675-1540743	0.961852	Ortholog	1/10	44/166
27	cavPor3-789	Cavia porcellus	mmu-miR-1959	18/20	scaffold_98	-	4-21	4594121-4594189	0.890533	Ortholog	1/10	44/166
28	cavPor3-783	Cavia porcellus	mmu-miR-1959	19/20	scaffold_91	-	9-28	4190444-4190518	0.996227	Ortholog	1/10	44/166
29	cavPor3-761	Cavia porcellus	mmu-miR-1959	19/20	scaffold_86	-	16-35	5790219-5790304	0.99989	Ortholog	1/10	44/166
30	cavPor3-682	Cavia porcellus	mmu-miR-1959	18/20	scaffold_65	+	53-70	3536038-3536123	0.944686	Ortholog	1/10	44/166
31	cavPor3-686	Cavia porcellus	mmu-miR-1959	18/20	scaffold_65	-	51-68	7608279-7608375	0.848542	Ortholog	1/10	44/166
32	cavPor3-601	Cavia porcellus	mmu-miR-1959	18/20	scaffold_46	-	26-43	8963493-8963578	0.99936	Ortholog	1/10	44/166
33	cavPor3-508	Cavia porcellus	mmu-miR-1959	18/20	scaffold_38	-	22-39	11020251-11020338	0.996207	Ortholog	1/10	44/166
34	cavPor3-446	Cavia porcellus	mmu-miR-1959	18/20	scaffold_31	+	7-24	15449026-15449084	0.986503	Ortholog	1/10	44/166
35	cavPor3-383	Cavia porcellus	mmu-miR-1959	18/20	scaffold_25	+	20-37	8831994-8832074	0.925147	Ortholog	1/10	44/166
36	cavPor3-393	Cavia porcellus	mmu-miR-1959	18/20	scaffold_25	-	14-31	12092014-12092083	0.909265	Ortholog	1/10	44/166
37	cavPor3-376	Cavia porcellus	mmu-miR-1959	18/20	scaffold_24	-	50-67	619754-619829	0.984618	Ortholog	1/10	44/166
38	cavPor3-377	Cavia porcellus	mmu-miR-1959	18/20	scaffold_24	-	16-33	3190623-3190700	0.991624	Ortholog	1/10	44/166
39	cavPor3-357	Cavia porcellus	mmu-miR-1959	18/20	scaffold_22	-	10-27	3032815-3032876	0.997691	Ortholog	1/10	44/166
40	cavPor3-356	Cavia porcellus	mmu-miR-1959	18/20	scaffold_22	+	26-43	9897967-9898059	0.99693	Ortholog	1/10	44/166
41	cavPor3-230	Cavia porcellus	mmu-miR-1959	18/20	scaffold_14	-	36-53	40789935-40790037	0.835575	Ortholog	1/10	44/166
42	cavPor3-199	Cavia porcellus	mmu-miR-1959	18/20	scaffold_13	+	4-21	13075727-13075797	0.972222	Ortholog	1/10	44/166
43	cavPor3-174	Cavia porcellus	mmu-miR-1959	18/20	scaffold_12	-	18-35	20560528-20560603	0.989679	Ortholog	1/10	44/166
44	cavPor3-423	Cavia porcellus	mmu-miR-1959	19/20	scaffold_3	+	51-70	13189607-13189697	0.846442	Ortholog	1/10	44/166
Total	44 record(s).

miRNA Series

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